Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CACNA1DQ01668 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 AP001094.4-201ENST00000579008 2176 ntBASIC14.63□□□□□ -0.07
CACNA1DQ01668 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 IGHV3-62-201ENST00000520057 340 ntBASIC14.63□□□□□ -0.07
CACNA1DQ01668 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 AC003101.2-201ENST00000612557 442 ntBASIC14.63□□□□□ -0.07
CACNA1DQ01668 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CACNA1DQ01668 AC022211.2-201ENST00000585075 2527 ntBASIC14.63□□□□□ -0.07
CACNA1DQ01668 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CACNA1DQ01668 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 AC008738.7-201ENST00000609744 511 ntBASIC14.62□□□□□ -0.07
CACNA1DQ01668 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.62□□□□□ -0.07
CACNA1DQ01668 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CACNA1DQ01668 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 AL161645.1-201ENST00000622716 1255 ntBASIC14.61□□□□□ -0.07
CACNA1DQ01668 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CACNA1DQ01668 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CACNA1DQ01668 SLC25A1P3-201ENST00000395415 828 ntBASIC14.61□□□□□ -0.07
CACNA1DQ01668 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms