Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.1■□□□□ 0.17
YBX1P67809 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
YBX1P67809 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.1■□□□□ 0.17
YBX1P67809 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 AC068137.2-201ENST00000605408 478 ntBASIC16.1■□□□□ 0.17
YBX1P67809 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
YBX1P67809 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.1■□□□□ 0.17
YBX1P67809 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
YBX1P67809 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
YBX1P67809 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
YBX1P67809 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.1■□□□□ 0.17
YBX1P67809 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
YBX1P67809 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.09■□□□□ 0.17
YBX1P67809 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
YBX1P67809 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.09■□□□□ 0.17
YBX1P67809 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.09■□□□□ 0.17
YBX1P67809 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.09■□□□□ 0.17
YBX1P67809 AC140658.5-201ENST00000438532 169 ntBASIC16.09■□□□□ 0.17
YBX1P67809 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.09■□□□□ 0.17
YBX1P67809 AC112482.1-201ENST00000492080 688 ntBASIC16.09■□□□□ 0.17
YBX1P67809 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.09■□□□□ 0.17
YBX1P67809 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.09■□□□□ 0.17
YBX1P67809 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.09■□□□□ 0.17
YBX1P67809 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.09■□□□□ 0.17
YBX1P67809 AC092865.5-201ENST00000545435 363 ntBASIC16.09■□□□□ 0.17
YBX1P67809 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.09■□□□□ 0.17
YBX1P67809 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
YBX1P67809 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.09■□□□□ 0.17
YBX1P67809 KRT8P39-201ENST00000396270 1433 ntBASIC16.09■□□□□ 0.17
YBX1P67809 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
YBX1P67809 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 AC010491.1-201ENST00000563101 2797 ntBASIC16.09■□□□□ 0.17
YBX1P67809 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
YBX1P67809 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
YBX1P67809 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
YBX1P67809 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.08■□□□□ 0.17
YBX1P67809 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
YBX1P67809 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
YBX1P67809 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 AL031731.1-201ENST00000642131 2094 ntBASIC16.08■□□□□ 0.16
YBX1P67809 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 BX842568.4-201ENST00000421222 227 ntBASIC16.08■□□□□ 0.16
YBX1P67809 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.08■□□□□ 0.16
YBX1P67809 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
YBX1P67809 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.08■□□□□ 0.16
YBX1P67809 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.08■□□□□ 0.16
YBX1P67809 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.08■□□□□ 0.16
YBX1P67809 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.08■□□□□ 0.16
YBX1P67809 AL031055.1-201ENST00000606362 631 ntBASIC16.08■□□□□ 0.16
YBX1P67809 AC091812.2-201ENST00000619081 385 ntBASIC16.08■□□□□ 0.16
YBX1P67809 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.08■□□□□ 0.16
YBX1P67809 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms