Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN2P57739 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN2P57739 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MRPS18AP1-201ENST00000414458 589 ntBASIC16.25■□□□□ 0.19
CLDN2P57739 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN2P57739 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
CLDN2P57739 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.25■□□□□ 0.19
CLDN2P57739 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.25■□□□□ 0.19
CLDN2P57739 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CLDN2P57739 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 GGT4P-201ENST00000623672 1708 ntBASIC16.25■□□□□ 0.19
CLDN2P57739 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN2P57739 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 RNF216P1-203ENST00000404404 2427 ntBASIC16.24■□□□□ 0.19
CLDN2P57739 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 AC093724.1-201ENST00000448659 1027 ntBASIC16.24■□□□□ 0.19
CLDN2P57739 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN2P57739 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN2P57739 BANF1P1-201ENST00000553684 263 ntBASIC16.24■□□□□ 0.19
CLDN2P57739 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.24■□□□□ 0.19
CLDN2P57739 AC105021.1-202ENST00000570572 669 ntBASIC16.24■□□□□ 0.19
CLDN2P57739 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 RN7SL828P-201ENST00000607615 303 ntBASIC16.24■□□□□ 0.19
CLDN2P57739 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDN2P57739 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDN2P57739 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDN2P57739 AC022211.2-201ENST00000585075 2527 ntBASIC16.23■□□□□ 0.19
CLDN2P57739 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN2P57739 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN2P57739 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN2P57739 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 390.2 ms