Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 AD000864.1-201ENST00000624076 2295 ntBASIC12.3□□□□□ -0.44
CMC4P56277 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CMC4P56277 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CMC4P56277 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMC4P56277 AC092919.2-201ENST00000623631 1645 ntBASIC12.29□□□□□ -0.44
CMC4P56277 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 GGT3P-204ENST00000453783 1664 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AC016027.1-202ENST00000607927 1699 ntBASIC12.29□□□□□ -0.44
CMC4P56277 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 AC026471.1-201ENST00000564629 3026 ntBASIC12.29□□□□□ -0.44
CMC4P56277 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 AC005237.2-201ENST00000434368 219 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AP006288.1-201ENST00000446065 395 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AC004967.1-201ENST00000453589 447 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AC098859.1-201ENST00000502915 1238 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.29□□□□□ -0.44
CMC4P56277 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
CMC4P56277 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.29□□□□□ -0.44
CMC4P56277 AC027307.2-201ENST00000591252 911 ntBASIC12.29□□□□□ -0.44
CMC4P56277 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 AC105339.1-204ENST00000636249 355 ntBASIC12.29□□□□□ -0.44
CMC4P56277 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.29□□□□□ -0.44
CMC4P56277 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMC4P56277 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMC4P56277 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 AL031731.1-201ENST00000642131 2094 ntBASIC12.28□□□□□ -0.44
CMC4P56277 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
CMC4P56277 HLA-A-202ENST00000376806 1854 ntBASIC12.28□□□□□ -0.44
CMC4P56277 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.28□□□□□ -0.44
CMC4P56277 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CMC4P56277 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.28□□□□□ -0.44
CMC4P56277 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
CMC4P56277 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.28□□□□□ -0.44
CMC4P56277 AC073389.1-201ENST00000595595 795 ntBASIC12.28□□□□□ -0.44
CMC4P56277 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.28□□□□□ -0.44
CMC4P56277 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMC4P56277 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms