Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.74■□□□□ 0.11
NR1H2P55055 AP002490.2-201ENST00000524791 560 ntBASIC15.74■□□□□ 0.11
NR1H2P55055 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 AL662844.1-201ENST00000546340 181 ntBASIC15.74■□□□□ 0.11
NR1H2P55055 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 AL596087.1-201ENST00000400979 1969 ntBASIC15.74■□□□□ 0.11
NR1H2P55055 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.74■□□□□ 0.11
NR1H2P55055 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 AC010491.1-201ENST00000563101 2797 ntBASIC15.74■□□□□ 0.11
NR1H2P55055 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 AC023157.3-201ENST00000619086 2088 ntBASIC15.74■□□□□ 0.11
NR1H2P55055 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NR1H2P55055 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
NR1H2P55055 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NR1H2P55055 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NR1H2P55055 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 TSPY12P-201ENST00000421279 868 ntBASIC15.73■□□□□ 0.11
NR1H2P55055 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.73■□□□□ 0.11
NR1H2P55055 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NR1H2P55055 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.73■□□□□ 0.11
NR1H2P55055 AL031008.1-201ENST00000619963 541 ntBASIC15.73■□□□□ 0.11
NR1H2P55055 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NR1H2P55055 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.73■□□□□ 0.11
NR1H2P55055 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NR1H2P55055 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.72■□□□□ 0.11
NR1H2P55055 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.72■□□□□ 0.11
NR1H2P55055 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NR1H2P55055 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NR1H2P55055 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms