Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.91■□□□□ 0.62
HMGCS2P54868 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 MIR6069-201ENST00000620069 79 ntBASIC18.91■□□□□ 0.62
HMGCS2P54868 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGCS2P54868 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
HMGCS2P54868 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGCS2P54868 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGCS2P54868 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGCS2P54868 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 AC079776.1-201ENST00000401540 1152 ntBASIC18.9■□□□□ 0.62
HMGCS2P54868 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS2P54868 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.9■□□□□ 0.62
HMGCS2P54868 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS2P54868 AL139010.1-201ENST00000454878 894 ntBASIC18.9■□□□□ 0.62
HMGCS2P54868 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS2P54868 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
HMGCS2P54868 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS2P54868 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.9■□□□□ 0.62
HMGCS2P54868 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.9■□□□□ 0.62
HMGCS2P54868 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGCS2P54868 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGCS2P54868 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCS2P54868 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCS2P54868 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.89■□□□□ 0.62
HMGCS2P54868 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMGCS2P54868 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMGCS2P54868 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS2P54868 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 MYCLP2-201ENST00000449268 967 ntBASIC18.89■□□□□ 0.61
HMGCS2P54868 ACA64.2-201ENST00000459014 129 ntBASIC18.89■□□□□ 0.61
HMGCS2P54868 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCS2P54868 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGCS2P54868 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.89■□□□□ 0.61
HMGCS2P54868 AC017083.2-201ENST00000608069 979 ntBASIC18.89■□□□□ 0.61
HMGCS2P54868 AL162274.1-201ENST00000617191 1098 ntBASIC18.89■□□□□ 0.61
HMGCS2P54868 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCS2P54868 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMGCS2P54868 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCS2P54868 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMGCS2P54868 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
HMGCS2P54868 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGCS2P54868 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGCS2P54868 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMGCS2P54868 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGCS2P54868 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGCS2P54868 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGCS2P54868 RN7SL837P-201ENST00000463010 287 ntBASIC18.88■□□□□ 0.61
HMGCS2P54868 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGCS2P54868 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms