Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 AL671277.1-201ENST00000429656 993 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 AC002558.1-201ENST00000488906 803 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 AC009093.7-201ENST00000623853 1223 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 AL035252.4-201ENST00000624174 288 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 Z92544.3-201ENST00000624747 417 ntBASIC16.95■□□□□ 0.3
ATXN3P54252 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.95■□□□□ 0.3
ATXN3P54252 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.95■□□□□ 0.3
ATXN3P54252 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATXN3P54252 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ATXN3P54252 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATXN3P54252 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATXN3P54252 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 ACTG1P4-201ENST00000425123 1122 ntBASIC16.94■□□□□ 0.3
ATXN3P54252 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.94■□□□□ 0.3
ATXN3P54252 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.94■□□□□ 0.3
ATXN3P54252 TERF1P3-201ENST00000505638 1227 ntBASIC16.94■□□□□ 0.3
ATXN3P54252 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.94■□□□□ 0.3
ATXN3P54252 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.94■□□□□ 0.3
ATXN3P54252 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.94■□□□□ 0.3
ATXN3P54252 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ATXN3P54252 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.94■□□□□ 0.3
ATXN3P54252 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
ATXN3P54252 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATXN3P54252 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATXN3P54252 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 AC009949.1-201ENST00000623048 1830 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.93■□□□□ 0.3
ATXN3P54252 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATXN3P54252 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.93■□□□□ 0.3
ATXN3P54252 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ATXN3P54252 DUX4L27-201ENST00000554796 1261 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 AC015911.4-201ENST00000588022 1070 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.93■□□□□ 0.3
ATXN3P54252 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.93■□□□□ 0.3
ATXN3P54252 AF228730.6-201ENST00000641497 218 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 AC084121.3-201ENST00000641716 218 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 AC105233.6-201ENST00000642093 218 ntBASIC16.93■□□□□ 0.3
ATXN3P54252 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
ATXN3P54252 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms