Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 ALG1L8P-201ENST00000533887 760 ntBASIC18.61■□□□□ 0.57
USP11P51784 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.61■□□□□ 0.57
USP11P51784 AL512356.2-201ENST00000546955 174 ntBASIC18.61■□□□□ 0.57
USP11P51784 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 AP001059.3-201ENST00000619053 235 ntBASIC18.61■□□□□ 0.57
USP11P51784 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.61■□□□□ 0.57
USP11P51784 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP11P51784 AC005052.1-201ENST00000625181 2492 ntBASIC18.61■□□□□ 0.57
USP11P51784 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.61■□□□□ 0.57
USP11P51784 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
USP11P51784 AP3S2-216ENST00000617003 1561 ntBASIC18.6■□□□□ 0.57
USP11P51784 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 KRT18P28-201ENST00000453838 1332 ntBASIC18.6■□□□□ 0.57
USP11P51784 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 RBPMS2P1-201ENST00000437762 623 ntBASIC18.6■□□□□ 0.57
USP11P51784 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.6■□□□□ 0.57
USP11P51784 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
USP11P51784 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP11P51784 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
USP11P51784 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 AL592424.1-201ENST00000563624 1536 ntBASIC18.59■□□□□ 0.57
USP11P51784 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 AC026150.2-201ENST00000564693 1156 ntBASIC18.59■□□□□ 0.57
USP11P51784 LINC00628-201ENST00000628516 1289 ntBASIC18.59■□□□□ 0.57
USP11P51784 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.59■□□□□ 0.57
USP11P51784 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
USP11P51784 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP11P51784 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
USP11P51784 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.58■□□□□ 0.57
USP11P51784 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.58■□□□□ 0.57
USP11P51784 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.58■□□□□ 0.57
USP11P51784 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP11P51784 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.58■□□□□ 0.56
USP11P51784 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
USP11P51784 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP11P51784 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 HLA-H-201ENST00000383620 1096 ntBASIC18.58■□□□□ 0.56
USP11P51784 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP11P51784 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.58■□□□□ 0.56
USP11P51784 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms