Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CSNK1DP48730 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1DP48730 PMS2P2-201ENST00000425039 1128 ntBASIC16.49■□□□□ 0.23
CSNK1DP48730 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CSNK1DP48730 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.49■□□□□ 0.23
CSNK1DP48730 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 RNA5SP410-201ENST00000516285 106 ntBASIC16.49■□□□□ 0.23
CSNK1DP48730 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1DP48730 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.49■□□□□ 0.23
CSNK1DP48730 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1DP48730 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.49■□□□□ 0.23
CSNK1DP48730 MIR4321-201ENST00000592276 80 ntBASIC16.49■□□□□ 0.23
CSNK1DP48730 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CSNK1DP48730 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CSNK1DP48730 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CSNK1DP48730 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.49■□□□□ 0.23
CSNK1DP48730 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CSNK1DP48730 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSNK1DP48730 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 REXO1L8P-201ENST00000604378 1897 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 PCDHA14-201ENST00000506751 2298 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 AL645939.2-201ENST00000427340 991 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 CNN2P2-201ENST00000443536 909 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 CNN2P3-201ENST00000450201 906 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 AC245100.5-201ENST00000452108 331 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.48■□□□□ 0.23
CSNK1DP48730 AL136317.3-201ENST00000618497 906 ntBASIC16.48■□□□□ 0.23
CSNK1DP48730 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.48■□□□□ 0.23
CSNK1DP48730 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSNK1DP48730 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.48■□□□□ 0.23
CSNK1DP48730 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1DP48730 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1DP48730 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.47■□□□□ 0.23
CSNK1DP48730 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 AC067863.1-201ENST00000494933 530 ntBASIC16.47■□□□□ 0.23
CSNK1DP48730 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.47■□□□□ 0.23
CSNK1DP48730 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
CSNK1DP48730 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 AC007967.4-201ENST00000614700 386 ntBASIC16.47■□□□□ 0.23
CSNK1DP48730 AC093028.1-201ENST00000622998 982 ntBASIC16.47■□□□□ 0.23
CSNK1DP48730 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.47■□□□□ 0.23
CSNK1DP48730 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSNK1DP48730 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms