Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A12P48065 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC6A12P48065 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC6A12P48065 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 LINC02199-201ENST00000506655 2702 ntBASIC15.9■□□□□ 0.14
SLC6A12P48065 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SLC6A12P48065 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC6A12P48065 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC6A12P48065 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A12P48065 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 MIR574-201ENST00000385209 96 ntBASIC15.89■□□□□ 0.13
SLC6A12P48065 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 PGAM5P1-201ENST00000518923 814 ntBASIC15.89■□□□□ 0.13
SLC6A12P48065 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC6A12P48065 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A12P48065 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC6A12P48065 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC6A12P48065 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC6A12P48065 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC6A12P48065 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SLC6A12P48065 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SLC6A12P48065 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC6A12P48065 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC6A12P48065 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms