Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
GRIA1P42261 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.76■□□□□ 0.27
GRIA1P42261 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.75■□□□□ 0.27
GRIA1P42261 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 POU5F1P6-201ENST00000466990 990 ntBASIC16.75■□□□□ 0.27
GRIA1P42261 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.75■□□□□ 0.27
GRIA1P42261 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.75■□□□□ 0.27
GRIA1P42261 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
GRIA1P42261 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.75■□□□□ 0.27
GRIA1P42261 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.75■□□□□ 0.27
GRIA1P42261 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GRIA1P42261 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.75■□□□□ 0.27
GRIA1P42261 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GRIA1P42261 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GRIA1P42261 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIA1P42261 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 CRYGEP-201ENST00000412192 528 ntBASIC16.74■□□□□ 0.27
GRIA1P42261 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIA1P42261 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 AC020765.3-201ENST00000613051 740 ntBASIC16.74■□□□□ 0.27
GRIA1P42261 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIA1P42261 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.74■□□□□ 0.27
GRIA1P42261 AC010507.1-201ENST00000633895 436 ntBASIC16.74■□□□□ 0.27
GRIA1P42261 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
GRIA1P42261 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GRIA1P42261 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GRIA1P42261 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GRIA1P42261 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
GRIA1P42261 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 AC005622.1-201ENST00000636801 1703 ntBASIC16.73■□□□□ 0.27
GRIA1P42261 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GRIA1P42261 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.73■□□□□ 0.27
GRIA1P42261 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms