Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 AC106028.4-201ENST00000614509 607 ntBASIC17.81■□□□□ 0.44
TNFSF9P41273 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF9P41273 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 AL589702.1-201ENST00000641229 1509 ntBASIC17.81■□□□□ 0.44
TNFSF9P41273 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF9P41273 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF9P41273 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TNFSF9P41273 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFSF9P41273 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TNFSF9P41273 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 PKD1P1-201ENST00000458669 6805 ntBASIC17.8■□□□□ 0.44
TNFSF9P41273 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFSF9P41273 AL645939.2-201ENST00000427340 991 ntBASIC17.8■□□□□ 0.44
TNFSF9P41273 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFSF9P41273 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFSF9P41273 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFSF9P41273 RFPL4AP1-201ENST00000530883 850 ntBASIC17.8■□□□□ 0.44
TNFSF9P41273 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.8■□□□□ 0.44
TNFSF9P41273 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFSF9P41273 RARRES2P9-201ENST00000565168 469 ntBASIC17.8■□□□□ 0.44
TNFSF9P41273 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.8■□□□□ 0.44
TNFSF9P41273 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.8■□□□□ 0.44
TNFSF9P41273 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNFSF9P41273 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 PCDH8P1-201ENST00000428983 2773 ntBASIC17.79■□□□□ 0.44
TNFSF9P41273 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.79■□□□□ 0.44
TNFSF9P41273 AC098859.1-201ENST00000502915 1238 ntBASIC17.79■□□□□ 0.44
TNFSF9P41273 AC069262.1-201ENST00000539058 672 ntBASIC17.79■□□□□ 0.44
TNFSF9P41273 AL512356.2-201ENST00000546955 174 ntBASIC17.79■□□□□ 0.44
TNFSF9P41273 AC025678.2-201ENST00000562061 970 ntBASIC17.79■□□□□ 0.44
TNFSF9P41273 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNFSF9P41273 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.79■□□□□ 0.44
TNFSF9P41273 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.79■□□□□ 0.44
TNFSF9P41273 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFSF9P41273 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
TNFSF9P41273 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.78■□□□□ 0.44
TNFSF9P41273 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TNFSF9P41273 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNFSF9P41273 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms