Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 RARRES2P8-201ENST00000566335 367 ntBASIC14.93□□□□□ -0.02
APOBEC1P41238 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.93□□□□□ -0.02
APOBEC1P41238 C20orf181-201ENST00000623918 480 ntBASIC14.93□□□□□ -0.02
APOBEC1P41238 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.93□□□□□ -0.02
APOBEC1P41238 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.93□□□□□ -0.02
APOBEC1P41238 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOBEC1P41238 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.93□□□□□ -0.02
APOBEC1P41238 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
APOBEC1P41238 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
APOBEC1P41238 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 AC005622.1-201ENST00000636801 1703 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 FAM58CP-201ENST00000435741 640 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 MKNK2P1-201ENST00000437526 628 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.92□□□□□ -0.02
APOBEC1P41238 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.92□□□□□ -0.02
APOBEC1P41238 AC099522.2-201ENST00000607001 744 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APOBEC1P41238 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 AC006449.5-201ENST00000610658 2098 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 PCDHB19P-201ENST00000570871 2371 ntBASIC14.92□□□□□ -0.02
APOBEC1P41238 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
APOBEC1P41238 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
APOBEC1P41238 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOBEC1P41238 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 AC018695.7-201ENST00000624587 2492 ntBASIC14.91□□□□□ -0.02
APOBEC1P41238 AC005052.1-201ENST00000625181 2492 ntBASIC14.91□□□□□ -0.02
APOBEC1P41238 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 U82695.1-201ENST00000635752 1889 ntBASIC14.91□□□□□ -0.02
APOBEC1P41238 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APOBEC1P41238 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.91□□□□□ -0.02
APOBEC1P41238 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 AL671277.1-201ENST00000429656 993 ntBASIC14.91□□□□□ -0.02
APOBEC1P41238 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.91□□□□□ -0.02
APOBEC1P41238 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.91□□□□□ -0.02
APOBEC1P41238 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.91□□□□□ -0.02
APOBEC1P41238 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.91□□□□□ -0.02
APOBEC1P41238 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
APOBEC1P41238 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.91□□□□□ -0.02
APOBEC1P41238 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 CYP2T1P-202ENST00000641596 2535 ntBASIC14.91□□□□□ -0.02
APOBEC1P41238 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APOBEC1P41238 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APOBEC1P41238 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms