Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.13■□□□□ 0.33
SCNN1AP37088 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.12■□□□□ 0.33
SCNN1AP37088 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SCNN1AP37088 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SCNN1AP37088 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.12■□□□□ 0.33
SCNN1AP37088 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.12■□□□□ 0.33
SCNN1AP37088 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.12■□□□□ 0.33
SCNN1AP37088 FAM220BP-201ENST00000377689 816 ntBASIC17.12■□□□□ 0.33
SCNN1AP37088 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.12■□□□□ 0.33
SCNN1AP37088 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.12■□□□□ 0.33
SCNN1AP37088 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.12■□□□□ 0.33
SCNN1AP37088 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.12■□□□□ 0.33
SCNN1AP37088 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.12■□□□□ 0.33
SCNN1AP37088 IGHV3-62-201ENST00000520057 340 ntBASIC17.12■□□□□ 0.33
SCNN1AP37088 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
SCNN1AP37088 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.12■□□□□ 0.33
SCNN1AP37088 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.12■□□□□ 0.33
SCNN1AP37088 AL513523.2-202ENST00000427283 2040 ntBASIC17.12■□□□□ 0.33
SCNN1AP37088 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SCNN1AP37088 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.12■□□□□ 0.33
SCNN1AP37088 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCNN1AP37088 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 AC092364.2-201ENST00000596710 2692 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 AL592309.1-201ENST00000443127 649 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 AP006288.1-201ENST00000446065 395 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 AC069335.1-201ENST00000489972 472 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 AC092865.5-201ENST00000545435 363 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 AC055717.3-201ENST00000622967 595 ntBASIC17.11■□□□□ 0.33
SCNN1AP37088 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SCNN1AP37088 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.11■□□□□ 0.33
SCNN1AP37088 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.11■□□□□ 0.33
SCNN1AP37088 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCNN1AP37088 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms