Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
SHC1P29353 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 BCAR1-209ENST00000546196 1340 ntBASIC15.18■□□□□ 0.02
SHC1P29353 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 AC025580.3-201ENST00000617932 1424 ntBASIC15.18■□□□□ 0.02
SHC1P29353 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.18■□□□□ 0.02
SHC1P29353 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.18■□□□□ 0.02
SHC1P29353 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.18■□□□□ 0.02
SHC1P29353 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SHC1P29353 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHC1P29353 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SHC1P29353 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
SHC1P29353 TSPY26P-202ENST00000565928 3884 ntBASIC15.18■□□□□ 0.02
SHC1P29353 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 AL353732.1-201ENST00000569618 1459 ntBASIC15.17■□□□□ 0.02
SHC1P29353 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SHC1P29353 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.17■□□□□ 0.02
SHC1P29353 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.17■□□□□ 0.02
SHC1P29353 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 KRT19P2-202ENST00000557173 1012 ntBASIC15.17■□□□□ 0.02
SHC1P29353 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 AC005412.3-201ENST00000580309 715 ntBASIC15.17■□□□□ 0.02
SHC1P29353 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 MIR4492-201ENST00000581627 80 ntBASIC15.17■□□□□ 0.02
SHC1P29353 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.17■□□□□ 0.02
SHC1P29353 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SHC1P29353 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SHC1P29353 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHC1P29353 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHC1P29353 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SHC1P29353 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms