Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.84■□□□□ 0.29
PTPN3P26045 AL591424.1-201ENST00000442569 1213 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 KRT18P3-201ENST00000451602 1288 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 RNA5SP416-201ENST00000516838 111 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 PDPK2P-202ENST00000562415 1191 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 FAM197Y3-203ENST00000618346 717 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 AC092865.6-201ENST00000642101 219 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 PCDHA1-201ENST00000378133 2726 ntBASIC16.84■□□□□ 0.29
PTPN3P26045 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
PTPN3P26045 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PTPN3P26045 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN3P26045 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN3P26045 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN3P26045 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN3P26045 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PTPN3P26045 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.83■□□□□ 0.29
PTPN3P26045 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN3P26045 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTPN3P26045 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PTPN3P26045 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN3P26045 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.83■□□□□ 0.28
PTPN3P26045 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.83■□□□□ 0.28
PTPN3P26045 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTPN3P26045 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTPN3P26045 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTPN3P26045 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
PTPN3P26045 AC005622.1-201ENST00000636801 1703 ntBASIC16.83■□□□□ 0.28
PTPN3P26045 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTPN3P26045 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTPN3P26045 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.82■□□□□ 0.28
PTPN3P26045 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.82■□□□□ 0.28
PTPN3P26045 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTPN3P26045 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms