Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.7■□□□□ 0.1
PRPH2P23942 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PRPH2P23942 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRPH2P23942 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRPH2P23942 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRPH2P23942 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.7■□□□□ 0.1
PRPH2P23942 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 MRPL3P1-201ENST00000400109 1033 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 AC092474.2-201ENST00000424288 719 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 AC079776.4-201ENST00000511039 504 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 RNA5SP415-201ENST00000517246 115 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
PRPH2P23942 AL662844.1-201ENST00000546340 181 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 AP001005.1-201ENST00000571755 1248 ntBASIC15.69■□□□□ 0.1
PRPH2P23942 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRPH2P23942 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.69■□□□□ 0.1
PRPH2P23942 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PRPH2P23942 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.68■□□□□ 0.1
PRPH2P23942 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRPH2P23942 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 AC245100.5-201ENST00000452108 331 ntBASIC15.68■□□□□ 0.1
PRPH2P23942 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.68■□□□□ 0.1
PRPH2P23942 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.68■□□□□ 0.1
PRPH2P23942 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.68■□□□□ 0.1
PRPH2P23942 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.68■□□□□ 0.1
PRPH2P23942 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 SLC25A6P4-201ENST00000586535 553 ntBASIC15.68■□□□□ 0.1
PRPH2P23942 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
PRPH2P23942 AC007064.4-201ENST00000637740 555 ntBASIC15.68■□□□□ 0.1
PRPH2P23942 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRPH2P23942 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 AC008741.2-201ENST00000612792 3115 ntBASIC15.68■□□□□ 0.1
PRPH2P23942 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.68■□□□□ 0.1
PRPH2P23942 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRPH2P23942 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms