Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 AL513523.2-202ENST00000427283 2040 ntBASIC17.99■□□□□ 0.47
RFX1P22670 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.99■□□□□ 0.47
RFX1P22670 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.99■□□□□ 0.47
RFX1P22670 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RFX1P22670 GPAA1P2-202ENST00000606848 1787 ntBASIC17.99■□□□□ 0.47
RFX1P22670 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFX1P22670 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 TNRC18P3-201ENST00000441896 2691 ntBASIC17.98■□□□□ 0.47
RFX1P22670 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RFX1P22670 FAM86GP-201ENST00000448322 971 ntBASIC17.98■□□□□ 0.47
RFX1P22670 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.98■□□□□ 0.47
RFX1P22670 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.98■□□□□ 0.47
RFX1P22670 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RFX1P22670 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 AC026691.1-201ENST00000602502 2017 ntBASIC17.98■□□□□ 0.47
RFX1P22670 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.98■□□□□ 0.47
RFX1P22670 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFX1P22670 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RFX1P22670 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.97■□□□□ 0.47
RFX1P22670 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 POU5F1P6-201ENST00000466990 990 ntBASIC17.97■□□□□ 0.47
RFX1P22670 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.97■□□□□ 0.47
RFX1P22670 AC007064.4-201ENST00000637740 555 ntBASIC17.97■□□□□ 0.47
RFX1P22670 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX1P22670 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 LINC01144-201ENST00000626198 1710 ntBASIC17.97■□□□□ 0.47
RFX1P22670 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
RFX1P22670 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RFX1P22670 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.97■□□□□ 0.47
RFX1P22670 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.96■□□□□ 0.47
RFX1P22670 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RFX1P22670 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RFX1P22670 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms