Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BCKDHBP21953 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
BCKDHBP21953 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 AL512652.2-201ENST00000625156 1716 ntBASIC16.2■□□□□ 0.18
BCKDHBP21953 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.2■□□□□ 0.18
BCKDHBP21953 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
BCKDHBP21953 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
BCKDHBP21953 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 AC092658.1-201ENST00000505836 891 ntBASIC16.2■□□□□ 0.18
BCKDHBP21953 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BCKDHBP21953 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.2■□□□□ 0.18
BCKDHBP21953 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 WFDC1-204ENST00000613603 549 ntBASIC16.2■□□□□ 0.18
BCKDHBP21953 AL033527.4-201ENST00000641026 673 ntBASIC16.2■□□□□ 0.18
BCKDHBP21953 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.2■□□□□ 0.18
BCKDHBP21953 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
BCKDHBP21953 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BCKDHBP21953 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 MEP1AP4-201ENST00000423244 1087 ntBASIC16.19■□□□□ 0.18
BCKDHBP21953 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.19■□□□□ 0.18
BCKDHBP21953 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.19■□□□□ 0.18
BCKDHBP21953 AC093726.1-201ENST00000608064 963 ntBASIC16.19■□□□□ 0.18
BCKDHBP21953 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BCKDHBP21953 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
BCKDHBP21953 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BCKDHBP21953 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BCKDHBP21953 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BCKDHBP21953 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BCKDHBP21953 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
BCKDHBP21953 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
BCKDHBP21953 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BCKDHBP21953 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms