Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN3P20807 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CAPN3P20807 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.96■□□□□ 0.15
CAPN3P20807 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN3P20807 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN3P20807 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN3P20807 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CAPN3P20807 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CAPN3P20807 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CAPN3P20807 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN3P20807 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CAPN3P20807 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.96■□□□□ 0.14
CAPN3P20807 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.96■□□□□ 0.14
CAPN3P20807 AL356309.3-201ENST00000624132 1934 ntBASIC15.96■□□□□ 0.14
CAPN3P20807 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN3P20807 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 AC126177.1-201ENST00000547829 2218 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 REXO1L8P-201ENST00000604378 1897 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN3P20807 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.95■□□□□ 0.14
CAPN3P20807 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
CAPN3P20807 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 RPS2P28-201ENST00000314255 741 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CAPN3P20807 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPN3P20807 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 RPL13AP23-201ENST00000480739 586 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPN3P20807 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.95■□□□□ 0.14
CAPN3P20807 MPDU1-223ENST00000582151 728 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 AL355385.1-201ENST00000606123 409 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 TP73-AS1-207ENST00000624167 988 ntBASIC15.95■□□□□ 0.14
CAPN3P20807 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.95■□□□□ 0.14
CAPN3P20807 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CAPN3P20807 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 KRT8P39-201ENST00000396270 1433 ntBASIC15.94■□□□□ 0.14
CAPN3P20807 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 DBET-201ENST00000630918 3363 ntBASIC15.94■□□□□ 0.14
CAPN3P20807 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 NUS1P2-201ENST00000417358 873 ntBASIC15.94■□□□□ 0.14
CAPN3P20807 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 BX005266.1-201ENST00000473402 457 ntBASIC15.94■□□□□ 0.14
CAPN3P20807 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.94■□□□□ 0.14
CAPN3P20807 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.94■□□□□ 0.14
CAPN3P20807 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.94■□□□□ 0.14
CAPN3P20807 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CAPN3P20807 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.94■□□□□ 0.14
CAPN3P20807 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CAPN3P20807 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
CAPN3P20807 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms