Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC005412.3-201ENST00000580309 715 ntBASIC16.51■□□□□ 0.23
XRCC1P18887 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 AC079781.4-201ENST00000641908 219 ntBASIC16.51■□□□□ 0.23
XRCC1P18887 AL645728.2-201ENST00000641974 660 ntBASIC16.51■□□□□ 0.23
XRCC1P18887 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
XRCC1P18887 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC1P18887 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
XRCC1P18887 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 AC211486.1-202ENST00000416371 468 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.5■□□□□ 0.23
XRCC1P18887 AC004967.1-201ENST00000453589 447 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
XRCC1P18887 AC211476.1-201ENST00000503899 468 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 AC124947.2-201ENST00000547118 1133 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.5■□□□□ 0.23
XRCC1P18887 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.5■□□□□ 0.23
XRCC1P18887 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.5■□□□□ 0.23
XRCC1P18887 MIR4515-201ENST00000584082 81 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 AC068137.2-201ENST00000605408 478 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
XRCC1P18887 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
XRCC1P18887 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
XRCC1P18887 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
XRCC1P18887 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XRCC1P18887 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
XRCC1P18887 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.49■□□□□ 0.23
XRCC1P18887 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC1P18887 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC1P18887 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
XRCC1P18887 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.49■□□□□ 0.23
XRCC1P18887 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
XRCC1P18887 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 ACTG1P14-201ENST00000446382 1122 ntBASIC16.49■□□□□ 0.23
XRCC1P18887 ALG1L5P-201ENST00000482043 771 ntBASIC16.49■□□□□ 0.23
XRCC1P18887 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.49■□□□□ 0.23
XRCC1P18887 AL031432.2-201ENST00000566714 459 ntBASIC16.49■□□□□ 0.23
XRCC1P18887 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC1P18887 AL928711.1-201ENST00000570165 459 ntBASIC16.49■□□□□ 0.23
XRCC1P18887 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
XRCC1P18887 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.49■□□□□ 0.23
XRCC1P18887 AC134684.3-201ENST00000641758 218 ntBASIC16.49■□□□□ 0.23
XRCC1P18887 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms