Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 AC079781.5-202ENST00000641784 3743 ntBASIC17.16■□□□□ 0.34
H2AFXP16104 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
H2AFXP16104 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.16■□□□□ 0.34
H2AFXP16104 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.16■□□□□ 0.34
H2AFXP16104 ACTG1P4-201ENST00000425123 1122 ntBASIC17.16■□□□□ 0.34
H2AFXP16104 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.16■□□□□ 0.34
H2AFXP16104 AC006058.3-201ENST00000606217 1069 ntBASIC17.16■□□□□ 0.34
H2AFXP16104 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFXP16104 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFXP16104 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 AC006504.5-208ENST00000588784 2401 ntBASIC17.15■□□□□ 0.34
H2AFXP16104 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 KLF4P1-201ENST00000412782 1185 ntBASIC17.15■□□□□ 0.34
H2AFXP16104 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 AC034232.1-201ENST00000506026 1064 ntBASIC17.15■□□□□ 0.34
H2AFXP16104 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.15■□□□□ 0.34
H2AFXP16104 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.15■□□□□ 0.34
H2AFXP16104 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.15■□□□□ 0.34
H2AFXP16104 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.15■□□□□ 0.34
H2AFXP16104 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 AL592424.1-201ENST00000563624 1536 ntBASIC17.15■□□□□ 0.34
H2AFXP16104 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
H2AFXP16104 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.15■□□□□ 0.34
H2AFXP16104 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
H2AFXP16104 MROH4P-201ENST00000431302 1578 ntBASIC17.15■□□□□ 0.34
H2AFXP16104 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFXP16104 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
H2AFXP16104 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
H2AFXP16104 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.14■□□□□ 0.34
H2AFXP16104 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.14■□□□□ 0.33
H2AFXP16104 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.14■□□□□ 0.33
H2AFXP16104 TSPY14P-201ENST00000303979 915 ntBASIC17.14■□□□□ 0.33
H2AFXP16104 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 FAM220CP-201ENST00000395253 831 ntBASIC17.14■□□□□ 0.33
H2AFXP16104 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
H2AFXP16104 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.14■□□□□ 0.33
H2AFXP16104 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.14■□□□□ 0.33
H2AFXP16104 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.14■□□□□ 0.33
H2AFXP16104 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.14■□□□□ 0.33
H2AFXP16104 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.14■□□□□ 0.33
H2AFXP16104 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2AFXP16104 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
H2AFXP16104 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms