Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
KRT3P12035 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
KRT3P12035 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
KRT3P12035 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.42■□□□□ 0.38
KRT3P12035 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT3P12035 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.42■□□□□ 0.38
KRT3P12035 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT3P12035 KRT19P2-202ENST00000557173 1012 ntBASIC17.42■□□□□ 0.38
KRT3P12035 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 AC027601.4-201ENST00000611259 610 ntBASIC17.42■□□□□ 0.38
KRT3P12035 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KRT3P12035 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT3P12035 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRT3P12035 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.42■□□□□ 0.38
KRT3P12035 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.42■□□□□ 0.38
KRT3P12035 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.41■□□□□ 0.38
KRT3P12035 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT3P12035 AL591424.1-201ENST00000442569 1213 ntBASIC17.41■□□□□ 0.38
KRT3P12035 POU5F1P6-201ENST00000466990 990 ntBASIC17.41■□□□□ 0.38
KRT3P12035 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 RNA5SP416-201ENST00000516838 111 ntBASIC17.41■□□□□ 0.38
KRT3P12035 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.41■□□□□ 0.38
KRT3P12035 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.41■□□□□ 0.38
KRT3P12035 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT3P12035 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
KRT3P12035 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
KRT3P12035 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT3P12035 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.41■□□□□ 0.38
KRT3P12035 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRT3P12035 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KRT3P12035 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.4■□□□□ 0.38
KRT3P12035 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KRT3P12035 MED15P5-201ENST00000423150 992 ntBASIC17.4■□□□□ 0.38
KRT3P12035 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 KRT18P3-201ENST00000451602 1288 ntBASIC17.4■□□□□ 0.38
KRT3P12035 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRT3P12035 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
KRT3P12035 AC109635.5-201ENST00000533593 962 ntBASIC17.4■□□□□ 0.38
KRT3P12035 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KRT3P12035 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms