Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CAPN1P07384 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN1P07384 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 IGLL3P-201ENST00000412472 434 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN1P07384 TOP3BP1-201ENST00000420768 1380 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CAPN1P07384 PAWRP1-201ENST00000451083 565 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN1P07384 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN1P07384 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.32■□□□□ 0.2
CAPN1P07384 OR7E47P-204ENST00000575924 449 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 MIR4751-201ENST00000578027 74 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CAPN1P07384 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN1P07384 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.32■□□□□ 0.2
CAPN1P07384 MTDHP5-201ENST00000598980 586 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.32■□□□□ 0.2
CAPN1P07384 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.32■□□□□ 0.2
CAPN1P07384 AC092865.6-201ENST00000642101 219 ntBASIC16.32■□□□□ 0.2
CAPN1P07384 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CAPN1P07384 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN1P07384 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN1P07384 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN1P07384 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.31■□□□□ 0.2
CAPN1P07384 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CAPN1P07384 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 MCCD1P2-201ENST00000423228 335 ntBASIC16.31■□□□□ 0.2
CAPN1P07384 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.31■□□□□ 0.2
CAPN1P07384 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.31■□□□□ 0.2
CAPN1P07384 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.31■□□□□ 0.2
CAPN1P07384 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 AL139011.1-202ENST00000642063 584 ntBASIC16.31■□□□□ 0.2
CAPN1P07384 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 AC005052.1-201ENST00000625181 2492 ntBASIC16.31■□□□□ 0.2
CAPN1P07384 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
CAPN1P07384 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.31■□□□□ 0.2
CAPN1P07384 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CAPN1P07384 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 AL162727.3-201ENST00000635661 2787 ntBASIC16.3■□□□□ 0.2
CAPN1P07384 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CAPN1P07384 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.3■□□□□ 0.2
CAPN1P07384 AC018845.2-201ENST00000568326 409 ntBASIC16.3■□□□□ 0.2
CAPN1P07384 MIR3687-2-201ENST00000577708 61 ntBASIC16.3■□□□□ 0.2
CAPN1P07384 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.3■□□□□ 0.2
CAPN1P07384 MIR3687-1-201ENST00000614492 61 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms