Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 HTR5BP-201ENST00000430851 1154 ntBASIC16.72■□□□□ 0.27
HLA-DQB2P05538 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 AL135744.1-201ENST00000565098 629 ntBASIC16.72■□□□□ 0.27
HLA-DQB2P05538 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.72■□□□□ 0.27
HLA-DQB2P05538 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 AC006449.6-201ENST00000612330 2296 ntBASIC16.72■□□□□ 0.27
HLA-DQB2P05538 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HLA-DQB2P05538 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 TFAMP1-201ENST00000412727 736 ntBASIC16.71■□□□□ 0.27
HLA-DQB2P05538 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AL671277.1-201ENST00000429656 993 ntBASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB2P05538 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB2P05538 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB2P05538 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms