Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 REXO1L8P-201ENST00000604378 1897 ntBASIC10.08□□□□□ -0.8
APOBP04114 AC135050.7-201ENST00000624508 2218 ntBASIC10.08□□□□□ -0.8
APOBP04114 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 AZGP1P1-201ENST00000411909 902 ntBASIC10.08□□□□□ -0.8
APOBP04114 Z93015.1-201ENST00000451718 390 ntBASIC10.08□□□□□ -0.8
APOBP04114 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.08□□□□□ -0.8
APOBP04114 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 RPL17P11-201ENST00000417593 544 ntBASIC10.08□□□□□ -0.8
APOBP04114 KRT18P64-201ENST00000434946 1219 ntBASIC10.08□□□□□ -0.8
APOBP04114 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.08□□□□□ -0.8
APOBP04114 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 AC026979.3-201ENST00000607315 403 ntBASIC10.08□□□□□ -0.8
APOBP04114 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 SLC25A24P2-201ENST00000415059 510 ntBASIC10.07□□□□□ -0.8
APOBP04114 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 AC124947.2-201ENST00000547118 1133 ntBASIC10.07□□□□□ -0.8
APOBP04114 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.07□□□□□ -0.8
APOBP04114 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 PP12613-201ENST00000424958 2230 ntBASIC10.07□□□□□ -0.8
APOBP04114 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
APOBP04114 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC10.07□□□□□ -0.8
APOBP04114 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC10.07□□□□□ -0.8
APOBP04114 MIR3907-201ENST00000579424 151 ntBASIC10.07□□□□□ -0.8
APOBP04114 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 NUS1P3-201ENST00000423502 862 ntBASIC10.07□□□□□ -0.8
APOBP04114 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 MPRIPP1-201ENST00000452433 1089 ntBASIC10.07□□□□□ -0.8
APOBP04114 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC10.07□□□□□ -0.8
APOBP04114 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
APOBP04114 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
APOBP04114 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms