Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LTAP01374 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.48□□□□□ -0.41
LTAP01374 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LTAP01374 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.47□□□□□ -0.41
LTAP01374 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 AC073508.3-201ENST00000619697 1419 ntBASIC12.47□□□□□ -0.41
LTAP01374 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.47□□□□□ -0.41
LTAP01374 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
LTAP01374 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.47□□□□□ -0.41
LTAP01374 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LTAP01374 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.47□□□□□ -0.41
LTAP01374 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 AP005901.3-202ENST00000581653 237 ntBASIC12.47□□□□□ -0.41
LTAP01374 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.47□□□□□ -0.41
LTAP01374 TMEM191A-211ENST00000637163 1067 ntBASIC12.47□□□□□ -0.41
LTAP01374 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
LTAP01374 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LTAP01374 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.47□□□□□ -0.41
LTAP01374 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.47□□□□□ -0.41
LTAP01374 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LTAP01374 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LTAP01374 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
LTAP01374 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 AC006486.2-201ENST00000624246 2199 ntBASIC12.46□□□□□ -0.41
LTAP01374 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.46□□□□□ -0.41
LTAP01374 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.46□□□□□ -0.41
LTAP01374 AL353135.1-201ENST00000606729 504 ntBASIC12.46□□□□□ -0.41
LTAP01374 AC005363.2-201ENST00000618631 242 ntBASIC12.46□□□□□ -0.41
LTAP01374 PGM5P2-202ENST00000637225 1043 ntBASIC12.46□□□□□ -0.41
LTAP01374 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.46□□□□□ -0.41
LTAP01374 AC092919.2-201ENST00000623631 1645 ntBASIC12.46□□□□□ -0.41
LTAP01374 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
LTAP01374 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LTAP01374 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.46□□□□□ -0.42
LTAP01374 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.46□□□□□ -0.42
LTAP01374 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LTAP01374 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LTAP01374 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms