Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLPTM1O96005 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC024563.2-201ENST00000603282 481 ntBASIC15.67■□□□□ 0.1
CLPTM1O96005 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CLPTM1O96005 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC139749.1-202ENST00000617529 3139 ntBASIC15.67■□□□□ 0.1
CLPTM1O96005 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.67■□□□□ 0.1
CLPTM1O96005 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLPTM1O96005 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLPTM1O96005 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CLPTM1O96005 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.66■□□□□ 0.1
CLPTM1O96005 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 AC005089.1-201ENST00000619486 2241 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLPTM1O96005 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.66■□□□□ 0.1
CLPTM1O96005 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 KRT18P48-201ENST00000434763 852 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.66■□□□□ 0.1
CLPTM1O96005 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 RNF126P1-202ENST00000569893 925 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.66■□□□□ 0.1
CLPTM1O96005 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 OR2I1P-210ENST00000642037 4691 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 PRAL-201ENST00000624952 3286 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLPTM1O96005 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 EGFEM1P-202ENST00000431685 1563 ntBASIC15.66■□□□□ 0.1
CLPTM1O96005 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.66■□□□□ 0.1
CLPTM1O96005 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms