Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL5O76039 AC006449.6-201ENST00000612330 2296 ntBASIC19.21■□□□□ 0.67
CDKL5O76039 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDKL5O76039 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL5O76039 KRT18P34-201ENST00000488218 1270 ntBASIC19.21■□□□□ 0.67
CDKL5O76039 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKL5O76039 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL5O76039 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKL5O76039 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL5O76039 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKL5O76039 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CDKL5O76039 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDKL5O76039 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKL5O76039 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL5O76039 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CDKL5O76039 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDKL5O76039 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL5O76039 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL5O76039 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 AL161645.1-201ENST00000622716 1255 ntBASIC19.2■□□□□ 0.66
CDKL5O76039 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDKL5O76039 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 AC026691.1-201ENST00000602502 2017 ntBASIC19.2■□□□□ 0.66
CDKL5O76039 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKL5O76039 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKL5O76039 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKL5O76039 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 PCDH8P1-201ENST00000428983 2773 ntBASIC19.19■□□□□ 0.66
CDKL5O76039 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.19■□□□□ 0.66
CDKL5O76039 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CDKL5O76039 AL078644.1-201ENST00000609881 752 ntBASIC19.19■□□□□ 0.66
CDKL5O76039 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL5O76039 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 AC005622.1-201ENST00000636801 1703 ntBASIC19.19■□□□□ 0.66
CDKL5O76039 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.19■□□□□ 0.66
CDKL5O76039 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CDKL5O76039 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CDKL5O76039 AL391005.1-201ENST00000623953 2435 ntBASIC19.19■□□□□ 0.66
CDKL5O76039 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms