Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PFDN1O60925 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PFDN1O60925 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 KRT19P1-201ENST00000405746 1186 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 DDX43P3-201ENST00000441064 443 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.75□□□□□ -0.05
PFDN1O60925 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 AC131212.3-201ENST00000624087 4219 ntBASIC14.75□□□□□ -0.05
PFDN1O60925 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PFDN1O60925 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PFDN1O60925 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PFDN1O60925 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PFDN1O60925 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 AL645728.1-201ENST00000366221 2101 ntBASIC14.74□□□□□ -0.05
PFDN1O60925 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PFDN1O60925 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PFDN1O60925 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.74□□□□□ -0.05
PFDN1O60925 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 AL163051.1-201ENST00000569214 1512 ntBASIC14.74□□□□□ -0.05
PFDN1O60925 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 GGT4P-201ENST00000623672 1708 ntBASIC14.74□□□□□ -0.05
PFDN1O60925 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PFDN1O60925 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 AC132938.6-201ENST00000623828 1655 ntBASIC14.74□□□□□ -0.05
PFDN1O60925 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.74□□□□□ -0.05
PFDN1O60925 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PFDN1O60925 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 AL928921.2-201ENST00000641325 2442 ntBASIC14.73□□□□□ -0.05
PFDN1O60925 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 AC106739.1-201ENST00000617035 715 ntBASIC14.73□□□□□ -0.05
PFDN1O60925 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms