Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 AL589702.1-201ENST00000641229 1509 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 FAM58DP-201ENST00000428076 619 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 AC098859.1-201ENST00000502915 1238 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 SLC25A39P2-201ENST00000537614 270 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 AP001160.2-201ENST00000596071 487 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 GPALPP1-207ENST00000611650 899 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 SPTSSB-204ENST00000617024 1292 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 REXO1L8P-201ENST00000604378 1897 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF11O60813 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF11O60813 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF11O60813 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AC027612.4-201ENST00000605371 583 ntBASIC16.7■□□□□ 0.26
PRAMEF11O60813 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.7■□□□□ 0.26
PRAMEF11O60813 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF11O60813 AL592424.1-201ENST00000563624 1536 ntBASIC16.7■□□□□ 0.26
PRAMEF11O60813 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF11O60813 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 KRT18P32-201ENST00000424695 1287 ntBASIC16.69■□□□□ 0.26
PRAMEF11O60813 AC023141.5-201ENST00000458585 616 ntBASIC16.69■□□□□ 0.26
PRAMEF11O60813 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 AC009093.7-201ENST00000623853 1223 ntBASIC16.69■□□□□ 0.26
PRAMEF11O60813 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF11O60813 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF11O60813 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms