Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.84■□□□□ 0.13
GFRA3O60609 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.84■□□□□ 0.13
GFRA3O60609 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.84■□□□□ 0.13
GFRA3O60609 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.84■□□□□ 0.13
GFRA3O60609 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.84■□□□□ 0.13
GFRA3O60609 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.84■□□□□ 0.13
GFRA3O60609 MSTO2P-201ENST00000314835 1709 ntBASIC15.84■□□□□ 0.13
GFRA3O60609 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GFRA3O60609 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.84■□□□□ 0.13
GFRA3O60609 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GFRA3O60609 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.84■□□□□ 0.13
GFRA3O60609 INTS4P2-202ENST00000614726 2019 ntBASIC15.84■□□□□ 0.13
GFRA3O60609 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
GFRA3O60609 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GFRA3O60609 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
GFRA3O60609 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GFRA3O60609 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.83■□□□□ 0.13
GFRA3O60609 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GFRA3O60609 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 AC073592.3-201ENST00000625118 1834 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.83■□□□□ 0.12
GFRA3O60609 MIR1227-201ENST00000408484 88 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 AL139010.1-201ENST00000454878 894 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 COX5BP1-201ENST00000507622 393 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.83■□□□□ 0.12
GFRA3O60609 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.83■□□□□ 0.12
GFRA3O60609 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.83■□□□□ 0.12
GFRA3O60609 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.83■□□□□ 0.12
GFRA3O60609 AC124283.3-201ENST00000570869 594 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 CLUHP6-201ENST00000580789 941 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 RN7SL736P-201ENST00000613111 269 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
GFRA3O60609 CROCCP3-202ENST00000420820 1947 ntBASIC15.83■□□□□ 0.12
GFRA3O60609 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.83■□□□□ 0.12
GFRA3O60609 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.83■□□□□ 0.12
GFRA3O60609 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
GFRA3O60609 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GFRA3O60609 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GFRA3O60609 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.82■□□□□ 0.12
GFRA3O60609 RPSAP36-202ENST00000494591 1261 ntBASIC15.82■□□□□ 0.12
GFRA3O60609 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.82■□□□□ 0.12
GFRA3O60609 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.82■□□□□ 0.12
GFRA3O60609 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.82■□□□□ 0.12
GFRA3O60609 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.82■□□□□ 0.12
GFRA3O60609 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
GFRA3O60609 AC005786.4-201ENST00000623369 682 ntBASIC15.82■□□□□ 0.12
GFRA3O60609 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GFRA3O60609 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
GFRA3O60609 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.82■□□□□ 0.12
GFRA3O60609 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.82■□□□□ 0.12
GFRA3O60609 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GFRA3O60609 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GFRA3O60609 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GFRA3O60609 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms