Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EXTL3O43909 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.88■□□□□ 0.45
EXTL3O43909 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.88■□□□□ 0.45
EXTL3O43909 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 AP000842.3-202ENST00000569238 1080 ntBASIC17.88■□□□□ 0.45
EXTL3O43909 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.88■□□□□ 0.45
EXTL3O43909 AC004835.2-201ENST00000603762 682 ntBASIC17.88■□□□□ 0.45
EXTL3O43909 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.88■□□□□ 0.45
EXTL3O43909 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.88■□□□□ 0.45
EXTL3O43909 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.88■□□□□ 0.45
EXTL3O43909 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
EXTL3O43909 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.88■□□□□ 0.45
EXTL3O43909 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EXTL3O43909 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.87■□□□□ 0.45
EXTL3O43909 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 AC142381.1-201ENST00000426099 345 ntBASIC17.87■□□□□ 0.45
EXTL3O43909 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.87■□□□□ 0.45
EXTL3O43909 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 SNHG9-202ENST00000564014 471 ntBASIC17.87■□□□□ 0.45
EXTL3O43909 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 AC084121.4-201ENST00000641598 221 ntBASIC17.87■□□□□ 0.45
EXTL3O43909 AF228730.8-201ENST00000642140 221 ntBASIC17.87■□□□□ 0.45
EXTL3O43909 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
EXTL3O43909 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EXTL3O43909 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
EXTL3O43909 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
EXTL3O43909 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
EXTL3O43909 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
EXTL3O43909 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.86■□□□□ 0.45
EXTL3O43909 CNN2P11-201ENST00000429351 262 ntBASIC17.86■□□□□ 0.45
EXTL3O43909 AC005237.2-201ENST00000434368 219 ntBASIC17.86■□□□□ 0.45
EXTL3O43909 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.86■□□□□ 0.45
EXTL3O43909 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.86■□□□□ 0.45
EXTL3O43909 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.86■□□□□ 0.45
EXTL3O43909 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
EXTL3O43909 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EXTL3O43909 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.86■□□□□ 0.45
EXTL3O43909 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms