Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 AL139400.1-201ENST00000366220 510 ntBASIC20.46■□□□□ 0.87
SRGAP3O43295 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.46■□□□□ 0.87
SRGAP3O43295 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.46■□□□□ 0.87
SRGAP3O43295 GPS2P2-201ENST00000430745 888 ntBASIC20.46■□□□□ 0.87
SRGAP3O43295 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.46■□□□□ 0.87
SRGAP3O43295 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.46■□□□□ 0.87
SRGAP3O43295 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.46■□□□□ 0.87
SRGAP3O43295 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.46■□□□□ 0.87
SRGAP3O43295 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SRGAP3O43295 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SRGAP3O43295 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SRGAP3O43295 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.46■□□□□ 0.87
SRGAP3O43295 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
SRGAP3O43295 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.45■□□□□ 0.86
SRGAP3O43295 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.45■□□□□ 0.86
SRGAP3O43295 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.45■□□□□ 0.86
SRGAP3O43295 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.45■□□□□ 0.86
SRGAP3O43295 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.45■□□□□ 0.86
SRGAP3O43295 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SRGAP3O43295 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SRGAP3O43295 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SRGAP3O43295 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 AC092364.2-201ENST00000596710 2692 ntBASIC20.44■□□□□ 0.86
SRGAP3O43295 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.44■□□□□ 0.86
SRGAP3O43295 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.44■□□□□ 0.86
SRGAP3O43295 TSEN15P1-201ENST00000423257 515 ntBASIC20.44■□□□□ 0.86
SRGAP3O43295 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.44■□□□□ 0.86
SRGAP3O43295 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.44■□□□□ 0.86
SRGAP3O43295 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.44■□□□□ 0.86
SRGAP3O43295 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.44■□□□□ 0.86
SRGAP3O43295 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SRGAP3O43295 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SRGAP3O43295 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SRGAP3O43295 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRGAP3O43295 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.43■□□□□ 0.86
SRGAP3O43295 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.43■□□□□ 0.86
SRGAP3O43295 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SRGAP3O43295 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.43■□□□□ 0.86
SRGAP3O43295 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.43■□□□□ 0.86
SRGAP3O43295 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.43■□□□□ 0.86
SRGAP3O43295 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms