Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.49■□□□□ 0.23
PHGDHO43175 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 AC008667.4-201ENST00000607370 168 ntBASIC16.49■□□□□ 0.23
PHGDHO43175 GGTLC5P-201ENST00000617623 998 ntBASIC16.49■□□□□ 0.23
PHGDHO43175 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.49■□□□□ 0.23
PHGDHO43175 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.49■□□□□ 0.23
PHGDHO43175 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHGDHO43175 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PHGDHO43175 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PHGDHO43175 AP002414.3-201ENST00000589352 1468 ntBASIC16.48■□□□□ 0.23
PHGDHO43175 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.48■□□□□ 0.23
PHGDHO43175 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.48■□□□□ 0.23
PHGDHO43175 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 KRT18P56-201ENST00000507275 550 ntBASIC16.48■□□□□ 0.23
PHGDHO43175 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PHGDHO43175 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.48■□□□□ 0.23
PHGDHO43175 AC012640.2-201ENST00000561606 901 ntBASIC16.48■□□□□ 0.23
PHGDHO43175 AC005412.3-201ENST00000580309 715 ntBASIC16.48■□□□□ 0.23
PHGDHO43175 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 AC008735.5-201ENST00000623544 497 ntBASIC16.48■□□□□ 0.23
PHGDHO43175 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
PHGDHO43175 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.48■□□□□ 0.23
PHGDHO43175 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHGDHO43175 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PHGDHO43175 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.47■□□□□ 0.23
PHGDHO43175 AC129492.6-201ENST00000611383 1305 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.47■□□□□ 0.23
PHGDHO43175 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PHGDHO43175 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.47■□□□□ 0.23
PHGDHO43175 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.47■□□□□ 0.23
PHGDHO43175 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHGDHO43175 EMBP1-201ENST00000458200 901 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.47■□□□□ 0.23
PHGDHO43175 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.47■□□□□ 0.23
PHGDHO43175 AL603832.2-201ENST00000566195 2125 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 AL356488.2-201ENST00000602755 427 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 MIR1199-201ENST00000621445 119 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 AP001350.2-201ENST00000625104 1094 ntBASIC16.47■□□□□ 0.23
PHGDHO43175 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PHGDHO43175 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PHGDHO43175 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PHGDHO43175 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PHGDHO43175 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PHGDHO43175 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.46■□□□□ 0.23
PHGDHO43175 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.46■□□□□ 0.23
PHGDHO43175 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.46■□□□□ 0.23
PHGDHO43175 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.46■□□□□ 0.23
PHGDHO43175 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms