Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.49■□□□□ 0.23
MID1O15344 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
MID1O15344 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.49■□□□□ 0.23
MID1O15344 AC093724.1-201ENST00000448659 1027 ntBASIC16.49■□□□□ 0.23
MID1O15344 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.49■□□□□ 0.23
MID1O15344 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.49■□□□□ 0.23
MID1O15344 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MID1O15344 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 LINC02560-201ENST00000596379 459 ntBASIC16.49■□□□□ 0.23
MID1O15344 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.49■□□□□ 0.23
MID1O15344 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.49■□□□□ 0.23
MID1O15344 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 AL035456.1-201ENST00000456064 1369 ntBASIC16.49■□□□□ 0.23
MID1O15344 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.49■□□□□ 0.23
MID1O15344 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MID1O15344 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 GGT4P-201ENST00000623672 1708 ntBASIC16.48■□□□□ 0.23
MID1O15344 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.48■□□□□ 0.23
MID1O15344 TSSK5P-201ENST00000423978 907 ntBASIC16.48■□□□□ 0.23
MID1O15344 FAM207CP-201ENST00000443486 507 ntBASIC16.48■□□□□ 0.23
MID1O15344 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.48■□□□□ 0.23
MID1O15344 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 HLA-V-204ENST00000476601 1289 ntBASIC16.48■□□□□ 0.23
MID1O15344 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.48■□□□□ 0.23
MID1O15344 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.48■□□□□ 0.23
MID1O15344 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 AC008761.3-201ENST00000624803 892 ntBASIC16.48■□□□□ 0.23
MID1O15344 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.48■□□□□ 0.23
MID1O15344 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
MID1O15344 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MID1O15344 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.47■□□□□ 0.23
MID1O15344 AC006538.1-201ENST00000567905 1585 ntBASIC16.47■□□□□ 0.23
MID1O15344 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.47■□□□□ 0.23
MID1O15344 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
MID1O15344 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MID1O15344 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms