Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 AC012313.10-201ENST00000623509 926 ntBASIC15.94■□□□□ 0.14
SLC28A1O00337 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC28A1O00337 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC28A1O00337 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC28A1O00337 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC28A1O00337 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A1O00337 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SLC28A1O00337 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A1O00337 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SLC28A1O00337 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A1O00337 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC28A1O00337 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC28A1O00337 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SLC28A1O00337 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC28A1O00337 PKD1P5-201ENST00000532415 10291 ntBASIC15.93■□□□□ 0.14
SLC28A1O00337 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC28A1O00337 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SLC28A1O00337 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 FAM197Y8-203ENST00000450145 560 ntBASIC15.92■□□□□ 0.14
SLC28A1O00337 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A1O00337 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A1O00337 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC28A1O00337 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.92■□□□□ 0.14
SLC28A1O00337 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SLC28A1O00337 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC28A1O00337 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC28A1O00337 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC28A1O00337 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC28A1O00337 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A1O00337 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC28A1O00337 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC28A1O00337 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A1O00337 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC28A1O00337 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A1O00337 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A1O00337 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC28A1O00337 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms