Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX39AO00148 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
DDX39AO00148 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.56■□□□□ 0.56
DDX39AO00148 AP001059.3-201ENST00000619053 235 ntBASIC18.56■□□□□ 0.56
DDX39AO00148 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 AC084121.4-201ENST00000641598 221 ntBASIC18.56■□□□□ 0.56
DDX39AO00148 AF228730.8-201ENST00000642140 221 ntBASIC18.56■□□□□ 0.56
DDX39AO00148 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
DDX39AO00148 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX39AO00148 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
DDX39AO00148 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.56■□□□□ 0.56
DDX39AO00148 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DDX39AO00148 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
DDX39AO00148 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DDX39AO00148 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX39AO00148 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
DDX39AO00148 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 HLA-J-202ENST00000469281 1241 ntBASIC18.55■□□□□ 0.56
DDX39AO00148 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.55■□□□□ 0.56
DDX39AO00148 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX39AO00148 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.55■□□□□ 0.56
DDX39AO00148 AC073389.1-201ENST00000595595 795 ntBASIC18.55■□□□□ 0.56
DDX39AO00148 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
DDX39AO00148 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX39AO00148 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX39AO00148 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX39AO00148 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX39AO00148 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX39AO00148 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX39AO00148 AC069262.1-201ENST00000539058 672 ntBASIC18.54■□□□□ 0.56
DDX39AO00148 DUX4L27-201ENST00000554796 1261 ntBASIC18.54■□□□□ 0.56
DDX39AO00148 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.54■□□□□ 0.56
DDX39AO00148 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX39AO00148 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX39AO00148 AC005052.1-201ENST00000625181 2492 ntBASIC18.54■□□□□ 0.56
DDX39AO00148 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX39AO00148 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
DDX39AO00148 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 AGGF1P2-201ENST00000426656 2106 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX39AO00148 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX39AO00148 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.53■□□□□ 0.56
DDX39AO00148 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX39AO00148 CNN2P2-201ENST00000443536 909 ntBASIC18.53■□□□□ 0.56
DDX39AO00148 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms