Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 KRT18P21-201ENST00000515767 1272 ntBASIC14.42□□□□□ -0.1
SHISA3A0PJX4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PGM5P2-202ENST00000637225 1043 ntBASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.42□□□□□ -0.1
SHISA3A0PJX4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AK4P3-201ENST00000418260 669 ntBASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AC005363.2-201ENST00000618631 242 ntBASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 REXO1L3P-201ENST00000622202 1288 ntBASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AC131009.4-201ENST00000624048 1740 ntBASIC14.41□□□□□ -0.1
SHISA3A0PJX4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHISA3A0PJX4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 SLC22A20-204ENST00000530038 1673 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms