Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 PRAL-201ENST00000624952 3286 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AP005117.1-202ENST00000581724 1908 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AC092910.1-201ENST00000482027 1129 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MIR4515-201ENST00000584082 81 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MIR7706-201ENST00000613747 67 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV7S3A2A0A539 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 RNU1-129P-201ENST00000384064 167 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 U1.21-201ENST00000580816 167 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 AL031008.1-201ENST00000619963 541 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PGM5P2-202ENST00000637225 1043 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 AL592424.1-201ENST00000563624 1536 ntBASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV7S3A2A0A539 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms