Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
A0A1W2PRF3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.63□□□□□ -0.23
A0A1W2PRF3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
A0A1W2PRF3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
A0A1W2PRF3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 SPDYE11-202ENST00000450699 704 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 AC092183.1-201ENST00000469884 875 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 SPDYE9P-201ENST00000570642 692 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 AL009183.1-201ENST00000603760 355 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 AC099522.2-201ENST00000607001 744 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 SPDYE10P-202ENST00000612005 668 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 SPDYE8P-202ENST00000612377 668 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 AC105020.1-201ENST00000435356 2205 ntBASIC13.62□□□□□ -0.23
A0A1W2PRF3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
A0A1W2PRF3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
A0A1W2PRF3 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 AL645728.1-201ENST00000366221 2101 ntBASIC13.61□□□□□ -0.23
A0A1W2PRF3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 RNU1-129P-201ENST00000384064 167 ntBASIC13.61□□□□□ -0.23
A0A1W2PRF3 AL355306.1-201ENST00000415580 579 ntBASIC13.61□□□□□ -0.23
A0A1W2PRF3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
A0A1W2PRF3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 KRT8P48-201ENST00000515599 1220 ntBASIC13.61□□□□□ -0.23
A0A1W2PRF3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.61□□□□□ -0.23
A0A1W2PRF3 U1.21-201ENST00000580816 167 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms