Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC093525.8-201ENST00000624099 1342 ntBASIC20.75■□□□□ 0.91
LOC102724428A0A0B4J2F2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LOC102724428A0A0B4J2F2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LOC102724428A0A0B4J2F2 Z97205.2-201ENST00000564697 1639 ntBASIC20.75■□□□□ 0.91
LOC102724428A0A0B4J2F2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 MIR1908-201ENST00000410394 80 ntBASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 AC084346.2-201ENST00000607097 949 ntBASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.74■□□□□ 0.91
LOC102724428A0A0B4J2F2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 U82695.1-201ENST00000635752 1889 ntBASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 MIR4321-201ENST00000592276 80 ntBASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 LINC01115-203ENST00000606068 577 ntBASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 AL133338.1-201ENST00000565695 1517 ntBASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.73■□□□□ 0.91
LOC102724428A0A0B4J2F2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 CTBP2P5-201ENST00000454986 1264 ntBASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 GPR182-203ENST00000622922 591 ntBASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LOC102724428A0A0B4J2F2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LOC102724428A0A0B4J2F2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms