Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HCFC2Q9Y5Z7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AC106820.2-201ENST00000563775 3264 ntBASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AL139010.1-201ENST00000454878 894 ntBASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AC119751.2-201ENST00000504529 210 ntBASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 WFDC1-204ENST00000613603 549 ntBASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HCFC2Q9Y5Z7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 GPAA1P2-202ENST00000606848 1787 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC234783.1-201ENST00000441761 496 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC007389.4-201ENST00000454674 793 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC092658.1-201ENST00000505836 891 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AC092337.1-201ENST00000568699 1129 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 AL033527.4-201ENST00000641026 673 ntBASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.11■□□□□ 0.33
HCFC2Q9Y5Z7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms