Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AC108751.1-201ENST00000490852 363 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 OR7E47P-204ENST00000575924 449 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AC116407.3-201ENST00000623905 1129 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ALOX12P2-203ENST00000570921 1945 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGA11Q9Y5H2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 AC098831.1-202ENST00000438821 336 ntBASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 FAM185BP-201ENST00000443595 716 ntBASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 MIR4751-201ENST00000578027 74 ntBASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 AL049840.3-201ENST00000602669 611 ntBASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 AC012569.1-201ENST00000591191 1524 ntBASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGA11Q9Y5H2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 HYMAI-201ENST00000635591 3347 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AL031731.1-201ENST00000642131 2094 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PAUPAR-201ENST00000630360 2965 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 MRPL3P1-201ENST00000400109 1033 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 CXCL1P1-201ENST00000502804 216 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 RNA5SP419-201ENST00000515908 135 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms