Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AP002414.1-201ENST00000391405 1147 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 NUS1P1-201ENST00000446295 882 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 VENTXP5-201ENST00000523979 775 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AL353801.3-201ENST00000609898 542 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AL031432.5-201ENST00000641059 760 ntBASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RCL1Q9Y2P8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 LINC02447-202ENST00000501888 2146 ntBASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.58□□□□□ -0.23
RCL1Q9Y2P8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC097637.2-201ENST00000624096 1997 ntBASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 HBZP1-201ENST00000354915 429 ntBASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 COX11P1-201ENST00000489116 835 ntBASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AD001527.2-201ENST00000622994 785 ntBASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AC073592.5-201ENST00000624854 528 ntBASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RCL1Q9Y2P8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 AC112504.1-201ENST00000623415 1841 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 REXO1L8P-201ENST00000604378 1897 ntBASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.57□□□□□ -0.24
RCL1Q9Y2P8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms