Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXD3Q9UJU5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FOXD3Q9UJU5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXD3Q9UJU5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.79□□□□□ -0.04
FOXD3Q9UJU5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FOXD3Q9UJU5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 RNU1-129P-201ENST00000384064 167 ntBASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 U1.21-201ENST00000580816 167 ntBASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AC084121.4-201ENST00000641598 221 ntBASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 AF228730.8-201ENST00000642140 221 ntBASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXD3Q9UJU5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 AL031731.1-201ENST00000642131 2094 ntBASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
FOXD3Q9UJU5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 KLF2P3-201ENST00000451977 1087 ntBASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AC051619.7-201ENST00000568314 623 ntBASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AC005498.2-205ENST00000593218 784 ntBASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AL391005.1-201ENST00000623953 2435 ntBASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 GGT4P-201ENST00000623672 1708 ntBASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FOXD3Q9UJU5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
FOXD3Q9UJU5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms