Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCDNQ9UBB6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCDNQ9UBB6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NCDNQ9UBB6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NCDNQ9UBB6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.36■□□□□ 0.21
NCDNQ9UBB6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 ELK2AP-201ENST00000392510 1007 ntBASIC16.35■□□□□ 0.21
NCDNQ9UBB6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 MIR1908-201ENST00000410394 80 ntBASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AC099548.2-209ENST00000480264 625 ntBASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.35■□□□□ 0.21
NCDNQ9UBB6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AC131009.4-201ENST00000624048 1740 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AL355994.2-201ENST00000447882 704 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AL512361.1-201ENST00000554200 418 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 SRD5A3P1-201ENST00000603021 949 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AC093726.1-201ENST00000608064 963 ntBASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NCDNQ9UBB6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 288.3 ms