Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 TERF1P3-201ENST00000505638 1227 ntBASIC18.56■□□□□ 0.56
COL20A1Q9P218 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL20A1Q9P218 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.56■□□□□ 0.56
COL20A1Q9P218 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 AC087499.5-201ENST00000452760 1342 ntBASIC18.55■□□□□ 0.56
COL20A1Q9P218 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 U82695.1-201ENST00000635752 1889 ntBASIC18.55■□□□□ 0.56
COL20A1Q9P218 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 AC024267.1-201ENST00000582320 895 ntBASIC18.55■□□□□ 0.56
COL20A1Q9P218 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL20A1Q9P218 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL20A1Q9P218 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.54■□□□□ 0.56
COL20A1Q9P218 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AL512361.1-201ENST00000554200 418 ntBASIC18.54■□□□□ 0.56
COL20A1Q9P218 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC004840.1-201ENST00000636359 365 ntBASIC18.54■□□□□ 0.56
COL20A1Q9P218 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL20A1Q9P218 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.54■□□□□ 0.56
COL20A1Q9P218 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.53■□□□□ 0.56
COL20A1Q9P218 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL20A1Q9P218 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL20A1Q9P218 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL20A1Q9P218 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL20A1Q9P218 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.53■□□□□ 0.56
COL20A1Q9P218 ALOX12P2-203ENST00000570921 1945 ntBASIC18.53■□□□□ 0.56
COL20A1Q9P218 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL20A1Q9P218 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL20A1Q9P218 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms