Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AC091046.1-201ENST00000331871 207 ntBASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 MIR33B-201ENST00000385104 96 ntBASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 MIR4750-201ENST00000584564 56 ntBASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 AC016027.1-202ENST00000607927 1699 ntBASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CNTNAP3Q9BZ76 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 NIFKP4-201ENST00000567275 1192 ntBASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 AC009542.2-202ENST00000619004 1067 ntBASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.72■□□□□ 0.11
CNTNAP3Q9BZ76 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 AL080243.2-201ENST00000418783 582 ntBASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 MIR8072-201ENST00000614241 80 ntBASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CNTNAP3Q9BZ76 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CNTNAP3Q9BZ76 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CNTNAP3Q9BZ76 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms