Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 PCGF3-213ENST00000620529 1899 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 PI4KAP1-204ENST00000612579 1703 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 SIGLEC29P-201ENST00000599873 1114 ntBASIC14□□□□□ -0.17
HDHD3Q9BSH5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HDHD3Q9BSH5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14□□□□□ -0.17
HDHD3Q9BSH5 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 GPAA1P2-202ENST00000606848 1787 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 AC092384.3-202ENST00000564646 2873 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 RBM17P3-201ENST00000417687 1192 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 AC139887.3-201ENST00000568585 713 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 CYP2A7P1-201ENST00000595391 815 ntBASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.99□□□□□ -0.17
HDHD3Q9BSH5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms